AutoICD API

96894-1

Laboratory

SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method

Definition

This panel contains sequencing and identification results for SARS coronavirus 2 (SARS-CoV-2) detected in various specimens. Results may include the genome sequence, identified S gene mutations of known and unknown significance, and the clade [LOINC: 96896-6], lineage [LOINC: 96895-8] and other (e.g. common) variant name [LOINC: 96741-4], such as "UK variant", based on the viral genome sequence and mutations found. Currently, lineage results may be determined using the Pangolin lineage assignment application (https://cov-lineages.org/pangolin.html), and clade assignment based on either the Nextstrain application (https://clades.nextstrain.org) or GISAID (https://www.gisaid.org/).

LOINC 6-Axis Classification

Component

SARS coronavirus 2 sequencing & identification panel

Property

-

Time Aspect

Pt

System

XXX

Scale Type

-

Method Type

Molgen

Details

Class

PANEL.MICRO

Order/Observation

Order

Short Name

SARS-CoV-2 Seq and ID Pnl Spec

Display Name

SARS-CoV-2 (COVID-19) sequencing and identification panel Molgen (Specimen)

Related Names

2019 Novel Coronavirus2019-nCoVCorona virusCOVID19COVID-19IDIIInfectious DiseaseInfectiousDiseaseMicrobiologyMiscMiscellaneousMolecular geneticsOtherPanPANEL.MICROBIOLOGYPanlPCRPnlPoint in timeRandomSARS Coronavirus 1SARS-CoVSARS-CoV-1SARS-CoV-2SARS-CoV-2 Seq and ID PnlSevere Acute Respiratory SyndromeSpecTo be specified in another part of the messageUnspecifiedViral PneumoniasWuhan coronavirus

Frequently Asked Questions

What is LOINC code 96894-1?

LOINC code 96894-1 identifies "SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method". This panel contains sequencing and identification results for SARS coronavirus 2 (SARS-CoV-2) detected in various specimens. Results may include the genome sequence, identified S gene mutations of known and unknown significance, and the clade [LOINC: 96896-6], lineage [LOINC: 96895-8] and other (e.g. common) variant name [LOINC: 96741-4], such as "UK variant", based on the viral genome sequence and mutations found. Currently, lineage results may be determined using the Pangolin lineage assignment application (https://cov-lineages.org/pangolin.html), and clade assignment based on either the Nextstrain application (https://clades.nextstrain.org) or GISAID (https://www.gisaid.org/).

What does 96894-1 measure?

This code measures SARS coronavirus 2 sequencing & identification panel in XXX. It belongs to the PANEL.MICRO class in the LOINC classification.

What is LOINC?

LOINC (Logical Observation Identifiers Names and Codes) is a universal standard for identifying laboratory and clinical observations. It is maintained by the Regenstrief Institute and used worldwide for health data exchange.