AutoICD API

85809-2

Laboratory

Bordetella pertussis and parapertussis and holmesii DNA panel - Specimen by NAA with probe detection

Definition

This panel contains qualitative results for targeted nucleic acid sequences within Bordetella pertussis, B. parapertussis, and B. holmesii DNA extracted from clinical specimens or culture isolates. This term is based on, but not limited in use to, the submitter's multi-target real-time PCR assay targeting multicopy insertion sequences (IS481, pIS1001, hIS1001) in combination with the pertussis toxin subunit S1 (ptxS1) gene for the identification of B. pertussis, B. parapertussis, and B. holmesii. The presence of IS481 and ptxS1 indicates B. pertussis, pIS1001 and ptxS1 indicates B. parapertussis, IS481 and hIS1001 indicates holmesii.[PMID: 21940464]

LOINC 6-Axis Classification

Component

Bordetella pertussis & parapertussis & holmesii DNA panel

Property

-

Time Aspect

Pt

System

XXX

Scale Type

-

Method Type

Probe.amp.tar

Details

Class

PANEL.MICRO

Order/Observation

Order

Short Name

B per + parap + holm DNA Pnl Spec NAA+pr

Display Name

B. pertussis and parapertussis and holmesii DNA panel NAA+probe (Specimen)

Related Names

3 Self-Sustaining Sequence Replication3SR SRAmplifAmplificationAmplifiedB per + parap + holm DNA PnlB pertB pertussisDeoxyribonucleic acidDNA NUCLEIC ACID PROBEDNA probeIDInfectious DiseaseInfectiousDiseaseLATLCRLigase chain reactionLigation-activated transcriptionMicrobiologyMiscMiscellaneousNAA+probeNAATNASBANucleic acid sequence based analysisOtherPanPANEL.MICROBIOLOGYPanlPCRPertussisPnlPoint in timePolymerase chain reactionProbe ampProbe with ampificationProbe with target amplificationQBRRandomSDASpecStrand Displacement AmplificationTMATo be specified in another part of the messageTranscription mediated amplificationUnspecifiedWhooping cough

Frequently Asked Questions

What is LOINC code 85809-2?

LOINC code 85809-2 identifies "Bordetella pertussis and parapertussis and holmesii DNA panel - Specimen by NAA with probe detection". This panel contains qualitative results for targeted nucleic acid sequences within Bordetella pertussis, B. parapertussis, and B. holmesii DNA extracted from clinical specimens or culture isolates. This term is based on, but not limited in use to, the submitter's multi-target real-time PCR assay targeting multicopy insertion sequences (IS481, pIS1001, hIS1001) in combination with the pertussis toxin subunit S1 (ptxS1) gene for the identification of B. pertussis, B. parapertussis, and B. holmesii. The presence of IS481 and ptxS1 indicates B. pertussis, pIS1001 and ptxS1 indicates B. parapertussis, IS481 and hIS1001 indicates holmesii.[PMID: 21940464]

What does 85809-2 measure?

This code measures Bordetella pertussis & parapertussis & holmesii DNA panel in XXX. It belongs to the PANEL.MICRO class in the LOINC classification.

What is LOINC?

LOINC (Logical Observation Identifiers Names and Codes) is a universal standard for identifying laboratory and clinical observations. It is maintained by the Regenstrief Institute and used worldwide for health data exchange.