AutoICD API

85355-6

Laboratory

PEDV S INDEL strain S gene [Cycle Threshold #] in Specimen by NAA with probe detection

Definition

Targeted PCR-based analysis of nucleic acids within the spike (S) gene specific to the S INDEL strain of the Porcine epidemic diarrhea virus (PEDV) and reported as a cross threshold (Ct) value. This assay is performed on various specimens, including fresh tissues (intestine), fluids (feces, intestinal content, oral fluid), fecal swabs, and other miscellaneous specimens (environmental, feed, feed pre-mix). This term was created for, but not limited in use to, the submitter's PEDV S gene In-Del differential PCR, which targets the highly conserved regions of the PEDV S gene in order to differentiate between the two strains of PEDV know to be circulating in North America: the original US strain (US PEDV prototype) [LOINC: 85356-4] and the variant US strain (S INDEL variant), represented by this term.

LOINC 6-Axis Classification

Component

Porcine epidemic diarrhea virus S INDEL strain S gene

Property

ThreshNum

Time Aspect

Pt

System

XXX

Scale Type

Qn

Method Type

Probe.amp.tar

Details

Class

MICRO

Order/Observation

Both

Short Name

PEDV S INDEL S gene Ct Spec Qn NAA+probe

Display Name

PEDV S INDEL strain S gene NAA+probe (Specimen) [ThreshNum]

Related Names

3 Self-Sustaining Sequence Replication3SR SRAmplifAmplificationAmplifiedDNA NUCLEIC ACID PROBEDNA probeLATLCRLigase chain reactionLigation-activated transcriptionMicrobiologyMiscMiscellaneousNAA+probeNAATNASBANucleic acid sequence based analysisOtherPCRPEDvPEDV S INDEL S genePoint in timePolymerase chain reactionPorkProbe ampProbe with ampificationProbe with target amplificationQBRQNTQuanQuantQuantitativeRandomS primeSDASpecStrand Displacement AmplificationSwineTMATo be specified in another part of the messageTranscription mediated amplificationUnspecifiedVetVeterinary

Frequently Asked Questions

What is LOINC code 85355-6?

LOINC code 85355-6 identifies "PEDV S INDEL strain S gene [Cycle Threshold #] in Specimen by NAA with probe detection". Targeted PCR-based analysis of nucleic acids within the spike (S) gene specific to the S INDEL strain of the Porcine epidemic diarrhea virus (PEDV) and reported as a cross threshold (Ct) value. This assay is performed on various specimens, including fresh tissues (intestine), fluids (feces, intestinal content, oral fluid), fecal swabs, and other miscellaneous specimens (environmental, feed, feed pre-mix). This term was created for, but not limited in use to, the submitter's PEDV S gene In-Del differential PCR, which targets the highly conserved regions of the PEDV S gene in order to differentiate between the two strains of PEDV know to be circulating in North America: the original US strain (US PEDV prototype) [LOINC: 85356-4] and the variant US strain (S INDEL variant), represented by this term.

What does 85355-6 measure?

This code measures Porcine epidemic diarrhea virus S INDEL strain S gene in XXX. It belongs to the MICRO class in the LOINC classification.

What is LOINC?

LOINC (Logical Observation Identifiers Names and Codes) is a universal standard for identifying laboratory and clinical observations. It is maintained by the Regenstrief Institute and used worldwide for health data exchange.