AutoICD API

74308-8

Laboratory

PRRSV ORF5 gene sequence homology to Ingelvac ATP in Isolate by Sequencing

Definition

Percent genomic homology between a new isolated PRRS virus strain and a PPRS vaccine strain (e.g. Lelystad, Fostera, IngelvacMLV or IngelvacATP) is based on the number of matching amino acids per total amino acids sequenced in the open reading frame 5 (ORF5) gene. The more homologous the ORF5 gene sequences, the more closely the variants are related. It is thought that sequence homology between isolates and vaccines will predict vaccine efficacy, however this is currently debated since little is known about the immune response to PRRS virus.

LOINC 6-Axis Classification

Component

Porcine reproductive and respiratory syndrome virus ORF5 gene sequence homology to Ingelvac ATP

Property

NFr

Time Aspect

Pt

System

Isolate

Scale Type

Qn

Method Type

Sequencing

Details

Class

MICRO

Order/Observation

Both

Short Name

PRRSV IngATP Hmlgy Islt Seq-NFr

Display Name

PRRSV ORF5 gene sequence homology to Ingelvac ATP Sequencing (Isol)

Related Names

Abortus blauwBlue-eared pig diseasehigh-throughput sequencingHTSIsltIsolLelystad virusMicrobiologyMystery swine diseaseNext generation sequencingNGSNumber fractionPercentPoint in timePorcine epidemic abortion & respiratory syndromePorcine reproductive and respiratory syndromePorkPRRSPRRSVPRRSV IngATP HmlgyPRRSV ORF5 genePRRSV ORF5 seqQNTQuanQuantQuantitativeRandomSeuchenhafter spatabort der schweineSIRSVSwineSwine infertility and respiratory syndromeSyndrome dysgenesique et respiratoire porcinVetVeterinary

Frequently Asked Questions

What is LOINC code 74308-8?

LOINC code 74308-8 identifies "PRRSV ORF5 gene sequence homology to Ingelvac ATP in Isolate by Sequencing". Percent genomic homology between a new isolated PRRS virus strain and a PPRS vaccine strain (e.g. Lelystad, Fostera, IngelvacMLV or IngelvacATP) is based on the number of matching amino acids per total amino acids sequenced in the open reading frame 5 (ORF5) gene. The more homologous the ORF5 gene sequences, the more closely the variants are related. It is thought that sequence homology between isolates and vaccines will predict vaccine efficacy, however this is currently debated since little is known about the immune response to PRRS virus.

What does 74308-8 measure?

This code measures Porcine reproductive and respiratory syndrome virus ORF5 gene sequence homology to Ingelvac ATP in Isolate. It belongs to the MICRO class in the LOINC classification.

What is LOINC?

LOINC (Logical Observation Identifiers Names and Codes) is a universal standard for identifying laboratory and clinical observations. It is maintained by the Regenstrief Institute and used worldwide for health data exchange.